New Computational Tool BIT Aids Gene Research by Identifying Transcriptional Regulators

Edited by: Elena HealthEnergy

Researchers at The University of Texas at Arlington (UTA) have developed a new computational tool called BIT (Bayesian Identification of Transcriptional Regulators from Epigenomics-Based Query Regions Sets). This tool helps scientists identify proteins, known as transcriptional regulators (TRs), that control gene expression. TRs are key to many biological processes, including growth, development, and disease.

BIT uses a method called Bayesian hierarchical modeling. This approach assesses probabilities across different types of evidence, allowing scientists to identify TRs more accurately, even in complex situations where multiple TRs are active at the same time. The tool integrates large amounts of data to show which regulators are active and how they work. The study was published in the journal *Nature Communications* in June 2024.

When TRs don't work correctly, they can cause health problems like cancer. BIT can help researchers find TRs that are important for tumor survival. This could lead to new treatments that target specific TRs to stop tumor growth. The tool can also help in studying metabolic disorders and heart disease. The development of BIT highlights the importance of machine learning and advanced statistics in modern research. The research was supported by the National Institutes of Health and the Cancer Prevention and Research Institute of Texas.

Sources

  • Technology Networks

  • Bayesian Learning Enhances Accuracy in Gene Research - Bioengineer.org

  • ZeyuL01/BIT: Bayesian Identification of Transcriptional regulators - GitHub

  • PMC - BIT: Bayesian Identification of Transcriptional Regulators from Epigenomics-Based Query Region Sets

  • Biomedical Computing and Intelligent Systems Laboratory - College of Engineering - The University of Texas at Arlington

  • Biomedical Research in AI and Neuroimaging Laboratory - The University of Texas at Arlington

  • Integrative Immunology Laboratory - The University of Texas at Arlington

  • Computational Data Science Lab - The University of Texas at Arlington

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